CulebrONT
1.3.2
Getting started
How to install CulebrONT ?
How to build singularity images?
How to build use Conda environments?
HPC specifications
Preparing
cluster_config.yaml
Available data test
Available tools
Why use CulebrONT ?
From assembly to correction
Assembly
Optional circularisation
Polishing
Correction
Quality on assemblies
Defining Workflows
How to create a workflow ?
1. Providing data
2. Chose assemblers, polisher and correctors
3. Chose quality tools
4. Parameters for some specific tools
How to run the workflow ?
Command line
Cluster execution
wrappers
profiles
Output on CulebrONT
Report
Project Info
Citation
Useful notes
Thanks
License
FAQ
Frequently Asked Questions
CulebrONT
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v: 1.3.2
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