Installation¶
Mandatory installation¶
CulebrONT uses could be of help (see below)
- Install or update CulebrONT
git clone https://github.com/SouthGreenPlatform/CulebrONT_pipeline.git
cd CulebrONT_pipeline
Optional Installation¶
To obtain a clear and correct report, please add also the following dependencies from R:
remote::install_github("strengejacke/strengejacke")
- ‘plotly’, ‘dplyr’, ‘optparse’, ‘htmltools’, ‘rmdformats’, ‘magrittr’, ‘yaml’, ‘png’, ‘here’, ‘htmlwidgets’.
Available data test¶
A data test Data-Xoo-sub/
is available on https://itrop.ird.fr/culebront_utilities/. Feel free to download it using wget
and put it on CulebrONT repertory.