Citation

@Authors:

Julie Orjuela (IRD), Aurore Comte(IRD), Sébastien Ravel(CIRAD), Florian Charriat(INRAE), Tram Vi(IRD, AGI), Francois Sabot(IRD) and Sébastien Cunnac(IRD).

Useful notes

Before launching CulebrONT, you could base-calling of arbitrarily multiplexed libraries across several Minion runs with sequencing quality control and gather the output files by genome for subsequent steps. For that use https://github.com/vibaotram/baseDmux.

Thanks

Thanks to Ndomassi Tando (i-Trop IRD) by administration support.

The authors acknowledge the IRD i-Trop HPC (South Green Platform) at IRD Montpellier for providing HPC resources that have contributed to this work. https://bioinfo.ird.fr/ - http://www.southgreen.fr

Thanks to Yann Delorme for this beautiful logo https://nimarell.github.io/resume

License

Licencied under CeCill-C (http://www.cecill.info/licences/Licence_CeCILL-C_V1-en.html) and GPLv3 Intellectual property belongs to IRD and authors.