CulebrONT
1.1.1
Getting started
Installation
Mandatory installation
Optional Installation
Available data test
Tools availables
From assembly to correction
Assembly
Circularisation
Polishing
Correction
Checking assembly quality
Mandatory Quality tools
Optional Quality tools
Output report
Defining Workflows
Prepare config.yaml
1. Providing data
2. Chose assemblers, polisher and correctors
3. Chose quality tools
4. Parameters for some specific tools
Launching on a single machine
Launching on HPC clusters
Preparing Slurm cluster configuration using cluster_config.yaml
submit_culebront.sh
slurm_wrapper
Output on CulebrONT
Report
Project Info
Citation
Useful notes
Thanks
License
CulebrONT
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v: 1.1.1
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